Fibernavigator: Interactive tractography visualization tool

Thursday, October 31, 2013 Do Tromp 0 Comments

Fibernavigator is an interactive diffusion imaging tractography visualization tool. That, as a bonus, is compatible with DTI data processed by FSL. You can download the open-source software for free from their github website (compatible with windows, mac and linux):

http://scilus.github.io/fibernavigator/

Watch their user tutorial here:

And their tutorial on real-time tractography of the optic radiation:

About This Website

"Diffusion Tensor Imaging is a cutting edge imaging technique that provides quantitive information with which to visualize and study connectivity and continuity of neural pathways in the central and peripheral nervous system in vivo." -Basser et al, 2000.

Diffusion-imaging.com gives a comprehensive overview of available software, analyzing methods and research possibilities. Providing background on the tools, methods and software to effectively analyze DTI data. Posts include step-by-step processing and tractography tutorials.

Diffusion imaging related questions?
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About the developer

Do was born and raised in the Netherlands, where she received her college education in the fields of science & innovation management, psychology and neuroscience. She then continued her education in the United States and received her PhD in neuroscience. During this period she became interested in using diffusion tensor imaging (DTI) to investigate how white matter microstructure may relate to psychopathology. While acquiring the skills to process and analyze this data she noticed the lack of guidelines and support for novice neuroimaging scientists in this field. Therefore, she decided to document all the skills she picked up from working in close collaboration with MRI physicist and DTI experts for nearly a decade and share them online at diffusion-imaging.com. By offering step-by-step tutorials and providing an online community of peers she hoped to provide support for academics worldwide who may not have direct access to DTI experts.

Fibernavigator: Interactive tractography visualization tool Thursday, October 31, 2013 Do Tromp 0 Comments

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Fibernavigator: Interactive tractography visualization tool

Thursday, October 31, 2013 Do Tromp 0 Comments